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Gephi Cookbook
Devangana Khokhar
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eBook - ePub
Gephi Cookbook
Devangana Khokhar
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Información
Categoría
Ciencia de la computaciónCategoría
Ciencias computacionales generalGephi Cookbook
Table of Contents
Gephi Cookbook
Credits
About the Author
Acknowledgments
About the Reviewers
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Preface
What this book covers
What you need for this book
Who this book is for
Sections
Getting ready
How to do it…
How it works…
There's more…
See also
Conventions
Reader feedback
Customer support
Downloading the color images of this book
Errata
Piracy
Questions
1. Getting Started with Gephi
Introduction
Installing Gephi
Getting ready
How to do it…
There's more…
See also
Troubleshooting the Gephi installation
How to do it…
How it works…
See also
Exploring Gephi's graphical user interface
Getting ready
How to do it…
How it works…
The basics of working in the Overview mode
Getting ready
How to do it…
See also
The basics of working in the Data Laboratory mode
Getting ready
How to do it…
See also
The basics of working in the Preview mode
Getting ready
How to do it…
See also
2. Basic Graph Manipulations
Introduction
Generating a random graph
How to do it…
There's more…
Selecting and highlighting nodes in the graph
How to do it…
How it works…
There's more…
Coloring and sizing nodes in the graph
How to do it…
How it works…
There's more…
Adding nodes and edges to the graph
How to do it…
How it works…
There's more…
Editing node attributes in the graph
How to do it…
There's more…
Finding out the shortest path in the graph
Getting ready
How to do it…
How it works…
There's more…
See also
Setting the edge and label properties
How to do it…
Setting basic properties for graphs, nodes, edges, and labels
Getting ready
How to do it…
Changing the background color of the graph
How to do it…
Generating a heat map for the graph
Getting ready
How to do it…
How it works…
There's more…
Showing convex hulls for a graph where a hierarchy exists
How to do it…
There's more…
See also
Showing/hiding various parts of the graph
How to do it…
How it works…
Reverting changes in the graph to the original presets
Getting ready
How to do it…
See also
Creating a PNG file directly from the graph window in user-specified sizes
Getting ready
How to do it…
How it works…
There's more…
See also
3. Using Graph Layout Algorithms
Introduction
Using the Clockwise Rotate layout algorithm
Getting ready
How to do it…
How it works…
There's more…
See also
Using the Counter-Clockwise Rotate layout algorithm
How to do it…
How it works…
There's more…
See also
Using the Contraction layout algorithm
How to do it…
How it works…
There's more…
See also
Using the Expansion layout algorithm
How to do it…
How it works…
There's more…
See also
Using the Force Atlas layout algorithm
How to do it…
How it works…
There's more…
There's more…
See also
Using the Force Atlas 2 layout algorithm
How to do it…
How it works…
There's more…
See also
Using the Fruchterman Reingold layout algorithm
How to do it…
How it works…
There's more…
See also
Using the Label Adjust layout algorithm
How to do it…
How it works…
There's more…
See also
Using the Random Layout algorithm
How to do it…
Using the Yifan Hu layout algorithm
How to do it…
How it works…
There's more…
See also
Using the Yifan Hu Proportional layout algorithm
How to do it…
See also
Using the Yifan Hu Multilevel layout algorithm
How to do it…
How it works…
There's more…
See also
4. Working with Partition and Ranking Algorithms
Introduction
Partitioning the graph based on node attributes
Getting ready
How to do it…
How it works…
There's more…
See also
Partitioning the graph based on edge attributes
Getting ready
How to do it…
How it works…
There's more…
Configuring node colors in a graph by ranking nodes
Getting ready
How to do it…
How it works…
See also
Configuring node sizes in a graph by ranking nodes
How to do it…
How it works…
Configuring node label colors in a graph by ranking nodes
Getting ready
How to do it…
How it works…
Configuring node label sizes in a graph by ranking nodes
Getting ready
How to do it…
How it works…
Configuring edge colors in a graph by ranking edges
How to do it…
How it works…
Configuring the colors of edge labels in a graph by ranking edges
Getting ready
How to do it…
How it works…
Configuring the size of edge labels in...