Introduction to Genomic Signal Processing with Control

Aniruddha Datta, Edward R. Dougherty

• Publisher: CRC Press
• Year: 2018
• Print ISBN: 9780849371981
• eBook ISBN: 9781420006674
• Edition: 1
• Topic: Technology & Engineering
• Subtopic: Electrical Engineering & Telecommunications
• Index: Technology & Engineering

Studying large sets of genes and their collective function requires tools that can easily handle huge amounts of information. Recent research indicates that engineering approaches for prediction, signal processing, and control are well suited for studying multivariate interactions. A tutorial guide to the current engineering research in genomics, Introduction to Genomic Signal Processing with Control provides a state-of-the-art account of the use of control theory to obtain intervention strategies for gene regulatory networks. The book builds up the necessary molecular biology background with a basic review of organic chemistry and an introduction of DNA, RNA, and proteins, followed by a description of the processes of transcription and translation and the genetic code that is used to carry out the latter. It discusses control of gene expression, introduces genetic engineering tools such as microarrays and PCR, and covers cell cycle control and tissue renewal in multi-cellular organisms.The authors then delineate how the engineering approaches of classification and clustering are appropriate for carrying out gene-based disease classification. This leads naturally to expression prediction, which in turn leads to genetic regulatory networks. The book concludes with a discussion of control approaches that can be used to alter the behavior of such networks in the hope that this alteration will move the network from a diseased state to a disease-free state.Written by recognized leaders in this emerging field, the book provides the exact amount of molecular biology required to understand the engineering applications. It is a self-contained resource that spans the diverse disciplines of molecular biology and electrical engineering.

Table of contents

• Cover
• Title
• Copyright
• Dedication
• Preface
• Contents
• Chapter 1: Introduction
• Chapter 2: Review of Organic Chemistry
• Chapter 3: Energy Considerations in Biochemical Reactions
• Chapter 4: Proteins
• Chapter 5: DNA
• Chapter 6: Transcription and Translation
• Chapter 7: Chromosomes and Gene Regulation
• Chapter 8: Genetic Variation
• Chapter 9: DNA Technology
• Chapter 10: Cell Division
• Chapter 11: Cell Cycle Control, Cell Death and Cancer
• Chapter 12: Expression Microarrays
• Chapter 13: Classification
• Chapter 14: Clustering
• Chapter 15: Genetic Regulatory Networks
• Chapter 16: Intervention
• Chapter 17: External Intervention Based on Optimal Control Theory
• References
• Index