Computing Skills for Biologists
eBook - PDF

Computing Skills for Biologists

A Toolbox

  1. English
  2. PDF
  3. Available on iOS & Android
eBook - PDF

Computing Skills for Biologists

A Toolbox

About this book

A concise introduction to key computing skills for biologists

While biological data continues to grow exponentially in size and quality, many of today's biologists are not trained adequately in the computing skills necessary for leveraging this information deluge. In Computing Skills for Biologists, Stefano Allesina and Madlen Wilmes present a valuable toolbox for the effective analysis of biological data.

Based on the authors' experiences teaching scientific computing at the University of Chicago, this textbook emphasizes the automation of repetitive tasks and the construction of pipelines for data organization, analysis, visualization, and publication. Stressing practice rather than theory, the book's examples and exercises are drawn from actual biological data and solve cogent problems spanning the entire breadth of biological disciplines, including ecology, genetics, microbiology, and molecular biology. Beginners will benefit from the many examples explained step-by-step, while more seasoned researchers will learn how to combine tools to make biological data analysis robust and reproducible. The book uses free software and code that can be run on any platform.

Computing Skills for Biologists is ideal for scientists wanting to improve their technical skills and instructors looking to teach the main computing tools essential for biology research in the twenty-first century.

  • Excellent resource for acquiring comprehensive computing skills
  • Both novice and experienced scientists will increase efficiency by building automated and reproducible pipelines for biological data analysis
  • Code examples based on published data spanning the breadth of biological disciplines
  • Detailed solutions provided for exercises in each chapter
  • Extensive companion website

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Yes, you can access Computing Skills for Biologists by Stefano Allesina,Madlen Wilmes in PDF and/or ePUB format. We have over one million books available in our catalogue for you to explore.

Table of contents

  1. Cover
  2. Title
  3. Copyright
  4. Dedication
  5. Summary of Contents
  6. Contents
  7. List of Figures
  8. Acknowledgments
  9. 0 Introduction: Building a Computing Toolbox
  10. 1 Unix
  11. 2 Version Control
  12. 3 Basic Programming
  13. 4 Writing Good Code
  14. 5 Regular Expressions
  15. 6 Scientific Computing
  16. 7 Scientific Typesetting
  17. 8 Statistical Computing
  18. 9 Data Wrangling and Visualization
  19. 10 Relational Databases
  20. 11 Wrapping Up
  21. Intermezzo Solutions
  22. Bibliography
  23. Indexes