Evolution
eBook - PDF

Evolution

  1. 800 pages
  2. English
  3. PDF
  4. Available on iOS & Android
eBook - PDF

Evolution

About this book

Mark Ridley's Evolution has become the premier undergraduate text in the study of evolution. Readable and stimulating, yet well-balanced and in-depth, this text tells the story of evolution, from the history of the study to the most revent developments in evolutionary theory.

The third edition of this successful textbook features updates and extensive new coverage. The sections on adaptation and diversity have been reorganized for improved clarity and flow, and a completely updated section on the evolution of sex and the inclusion of more plant examples have all helped to shape this new edition. Evolution also features strong, balanced coverage of population genetics, and scores of new applied plant and animal examples make this edition even more accessible and engaging.

  • Dedicated website – provides an interactive experience of the book, with illustrations downloadable to PowerPoint, and a full supplemental package complementing the book – www.blackwellpublishing.com/ridley.
  • Margin icons – indicate where there is relevant information included in the dedicated website.
  • Two new chapters – one on evolutionary genomics and one on evolution and development bring state-of-the-art information to the coverage of evolutionary study.
  • Two kinds of boxes – one featuring practical applications and the other related information, supply added depth without interrupting the flow of the text.
  • Margin comments – paraphrase and highlight key concepts.
  • Study and review questions – help students review their understanding at the end of each chapter, while new challenge questions prompt students to synthesize the chapter concepts to reinforce the learning at a deeper level.

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Information

Table of contents

  1. Cover
  2. Brief Contents
  3. Full Contents
  4. Preface
  5. Part one Introduction
  6. 1 The Rise of Evolutionary Biology
  7. 2 Molecular and Mendelian Genetics
  8. 3 The Evidence for Evolution
  9. 4 Natural Selection and Variation
  10. Part two Evolutionary Genetics
  11. 5 The Theory of Natural Selection
  12. 5.1 Population genetics is concerned with genotype and gene frequencies
  13. 5.2 An elementary population genetic model has four main steps
  14. 5.3 Genotype frequencies in the absence of selection go to the Hardy–Weinberg equilibrium
  15. 5.4 We can test, by simple observation, whether genotypes in a population are at the Hardy–Weinberg equilibrium
  16. 5.5 The Hardy–Weinberg theorem is important conceptually, historically, in practical research, and in the workings of theoretical models
  17. 5.6 The simplest model of selection is for one favored allele at one locus
  18. 5.7 The model of selection can be applied to the peppered moth
  19. 5.7.1 Industrial melanism in moths evolved by natural selection
  20. 5.7.2 One estimate of the fitnesses is made using the rate of change in gene frequencies
  21. 5.7.3 A second estimate of the fitnesses is made from the survivorship of the different genotypes in mark– recapture experiments
  22. 5.7.4 The selective factor at work is controversial, but bird predation was probably influential
  23. 5.8 Pesticide resistance in insects is an example of natural selection
  24. 5.9 Fitnesses are important numbers in evolutionary theory and can be estimated by three main methods
  25. 5.10 Natural selection operating on a favored allele at a single locus is not meant to be a general model of evolution
  26. 5.11 A recurrent disadvantageous mutation will evolve to a calculable equilibrial frequency
  27. 5.12 Heterozygous advantage
  28. 5.12.1 Selection can maintain a polymorphism when the heterozygote is fitter than either homozygote
  29. 5.12.2 Sickle cell anemia is a polymorphism with heterozygous advantage
  30. 5.13 The fitness of a genotype may depend on its frequency
  31. 5.14 Subdivided populations require special population genetic principles
  32. 5.14.1 A subdivided set of populations have a higher proportion of homozygotes than an equivalent fused population: this is the Wahlund effect
  33. 5.14.2 Migration acts to unify gene frequencies between populations
  34. 5.14.3 Convergence of gene frequencies by gene flow is illustrated by the human population of the USA
  35. 5.14.4 A balance of selection and migration can maintain genetic differences between subpopulations
  36. Summary
  37. Further reading
  38. Study and review questions
  39. 6 Random Events in Population Genetics
  40. 6.1 The frequency of alleles can change at random through time in a process called genetic drift
  41. 6.2 A small founder population may have a non-representative sample of the ancestral population’s genes
  42. 6.3 One gene can be substituted for another by random drift
  43. 6.4 Hardy–Weinberg “equilibrium” assumes the absence of genetic drift
  44. 6.5 Neutral drift over time produces a march to homozygosity
  45. 6.6 A calculable amount of polymorphism will exist in a population because of neutral mutation
  46. 6.7 Population size and effective population size
  47. Summary
  48. Further reading
  49. Study and review questions
  50. 7 Natural Selection and Random Drift in Molecular Evolution
  51. 7.1 Random drift and natural selection can both hypothetically explain molecular evolution
  52. 7.2 Rates of molecular evolution and amounts of genetic variation can be measured
  53. 7.3 Rates of molecular evolution are arguably too constant for a process controlled by natural selection
  54. 7.4 The molecular clock shows a generation time effect
  55. 7.5 The nearly neutral theory
  56. 7.5.1 The “purely” neutral theory faces several empirical problems
  57. 7.5.2 The nearly neutral theory of molecular evolution posits a class of nearly neutral mutations
  58. 7.5.3 The nearly neutral theory can explain the observed facts better than the purely neutral theory
  59. 7.5.4 The nearly neutral theory is conceptually closely related to the original, purely neutral theory
  60. 7.6 Evolutionary rate and functional constraint
  61. 7.6.1 More functionally constrained parts of proteins evolve at slower rates
  62. 7.6.2 Both natural selection and neutral drift can explain the trend for proteins, but only drift is plausible for DNA
  63. 7.7 Conclusion and comment: the neutralist paradigm shift
  64. 7.8 Genomic sequences have led to new ways of studying molecular evolution
  65. 7.8.1 DNA sequences provide strong evidence for natural selection on protein structure
  66. 7.8.2 A high ratio of non-synonymous to synonymous changes provides evidence of selection
  67. 7.8.3 Selection can be detected by comparisons of the dN/dS ratio within and between species
  68. 7.8.4 The gene for lysozyme has evolved convergently in cellulose-digesting mammals
  69. 7.8.5 Codon usages are biased
  70. 7.8.6 Positive and negative selection leave their signatures in DNA sequences
  71. 7.9 Conclusion: 35 years of research on molecular evolution
  72. Summary
  73. Further reading
  74. Study and review questions
  75. 8 Two-locus and Multilocus Population Genetics
  76. 8.1 Mimicry in Papilio is controlled by more than one genetic locus
  77. 8.2 Genotypes at different loci in Papilio memnon are coadapted
  78. 8.3 Mimicry in Heliconius is controlled by more than one gene, but they are not tightly linked
  79. 8.4 Two-locus genetics is concerned with haplotype frequencies
  80. 8.5 Frequencies of haplotypes may or may not be in linkage equilibrium
  81. 8.6 Human HLA genes are a multilocus gene system
  82. 8.7 Linkage disequilibrium can exist for several reasons
  83. 8.8 Two-locus models of natural selection can be built
  84. 8.9 Hitch-hiking occurs in two-locus selection models
  85. 8.10 Selective sweeps can provide evidence of selection in DNA sequences
  86. 8.11 Linkage disequilibrium can be advantageous, neutral, or disadvantageous
  87. 8.12 Wright invented the influential concept of an adaptive topography
  88. 8.13 The shifting balance theory of evolution
  89. Summary
  90. Further reading
  91. Study and review questions
  92. 9 Quantitative Genetics
  93. 9.1 Climatic changes have driven the evolution of beak size in one of Darwin’s finches
  94. 9.2 Quantitative genetics is concerned with characters controlled by large numbers of genes
  95. 9.3 Variation is first divided into genetic and environmental effects
  96. 9.4 Variance of a character is divided into genetic and environmental effects
  97. 9.5 Relatives have similar genotypes, producing the correlation between relatives
  98. 9.6 Heritability is the proportion of phenotypic variance that is additive
  99. 9.7 A character’s heritability determines its response to artificial selection
  100. 9.8 Strength of selection has been estimated in many studies of natural populations
  101. 9.9 Relations between genotype and phenotype may be non-linear, producing remarkable responses to selection
  102. 9.10 Stabilizing selection reduces the genetic variability of a character
  103. 9.11 Characters in natural populations subject to stabilizing selection show genetic variation
  104. 9.12 Levels of genetic variation in natural populations are imperfectly understood
  105. 9.13 Conclusion
  106. Summary
  107. Further reading
  108. Study and review questions
  109. Part three Adaptation and Natural Selection
  110. 10 Adaptive Explanation
  111. 10.1 Natural selection is the only known explanation for adaptation
  112. 10.2 Pluralism is appropriate in the study of evolution, not of adaptation
  113. 10.3 Natural selection can in principle explain all known adaptations
  114. 10.4 New adaptations evolve in continuous stages from pre-existing adaptations, but the continuity takes various forms
  115. 10.4.1 In Darwin’s theory, no special process produces evolutionary novelties
  116. 10.4.2 The function of an adaptation may change with little change in its form
  117. 10.4.3 A new adaptation may evolve by combining unrelated parts
  118. 10.5 Genetics of adaptation
  119. 10.5.1 Fisher proposed a model, and microscope analogy, to explain why the genetic changes in adaptive evolution will be small
  120. 10.5.2 An expanded theory is needed when an organism is not near an adaptive peak
  121. 10.5.3 The genetics of adaptation is being studied experimentally
  122. 10.5.4 Conclusion: the genetics of adaptation
  123. 10.6 Three main methods are used to study adaptation
  124. 10.7 Adaptations in nature are not perfect
  125. 10.7.1 Adaptations may be imperfect because of time lags
  126. 10.7.2 Genetic constraints may cause imperfect adaptation
  127. 10.7.3 Developmental constraints may cause adaptive imperfection
  128. 10.7.4 Historic constraints may cause adaptive imperfection
  129. 10.7.5 An organism’s design may be a trade-off between different adaptive needs
  130. 10.7.6 Conclusion: constraints on adaptation
  131. 10.8 How can we recognize adaptations?
  132. 10.8.1 The function of an organ should be distinguished from the effects it may have
  133. 10.8.2 Adaptations can be defined by engineering design or reproductive fitness
  134. Summary
  135. Further reading
  136. Study and review questions
  137. 11 The Units of Selection
  138. 11.1 What entities benefit from the adaptations produced by selection?
  139. 11.2 Natural selection has produced adaptations that benefit various levels of organization
  140. 11.2.1 Segregation distortion benefits one gene at the expense of its allele
  141. 11.2.2 Selection may sometimes favor some cell lines relative to other cell lines in the same body
  142. 11.2.3 Natural selection has produced many adaptations to benefit organisms
  143. 11.2.4 Natural selection working on groups of close genetic relatives is called kin selection
  144. 11.2.5 Whether group selection ever produces adaptations for the benefit of groups has been controversial, though most biologists now think it is only a weak force in evolution
  145. 11.2.6 Which level in the hierarchy of organization levels will evolve adaptations is controlled by which level shows heritability
  146. 11.3 Another sense of “unit of selection” is the entity whose frequency is adjusted directly by natural selection
  147. 11.4 The two senses of “unit of selection” are compatible: one specifies the entity that generally shows phenotypic adaptations, the other the entity whose frequency is generally adjusted by natural selection
  148. Summary
  149. Further reading
  150. Study and review questions
  151. 12 Adaptations in Sexual Reproduction
  152. 12.1 The existence of sex is an outstanding, unsolved problem in evolutionary biology
  153. 12.1.1 Sex has a 50% cost
  154. 12.1.2 Sex is unlikely to be explained by genetic constraint
  155. 12.1.3 Sex can accelerate the rate of evolution
  156. 12.1.4 Is sex maintained by group selection?
  157. 12.2 There are two main theories in which sex may have a short-term advantage
  158. 12.2.1 Sexual reproduction can enable females to reduce the number of deleterious mutations in their offspring
  159. 12.2.2 The mutational theory predicts U>1
  160. 12.2.3 Coevolution of parasites and hosts may produce rapid environmental change
  161. 12.3 Conclusion: it is uncertain how sex is adaptive
  162. 12.4 The theory of sexual selection explains many differences between males and females
  163. 12.4.1 Sexual characters are often apparently deleterious
  164. 12.4.2 Sexual selection acts by male competition and female choice
  165. 12.4.3 Females may choose to pair with particular males
  166. 12.4.4 Females may prefer to pair with handicapped males, because the male’s survival indicates his high quality
  167. 12.4.5 Female choice in most models of Fisher’s and Zahavi’s theories is open ended, and this condition can be tested
  168. 12.4.6 Fisher’s theory requires heritable variation in the male character, and Zahavi’s theory requires heritable variation in fitness
  169. 12.4.7 Natural selection may work in conflicting ways on males and females
  170. 12.4.8 Conclusion: the theory of sex differences is well worked out but incompletely tested
  171. 12.5 The sex ratio is a well understood adaptation
  172. 12.5.1 Natural selection usually favors a 50 : 50 sex ratio
  173. 12.5.2 Sex ratios may be biased when either sons or daughters disproportionately act as “helpers at the nest”
  174. 12.6 Different adaptations are understood in different levels of detail
  175. Summary
  176. Further reading
  177. Study and review questions
  178. Part four Evolution and Diversity
  179. 13 Species Concepts and Intraspecific Variation
  180. 13.1 In practice species are recognized and defined by phenetic characters
  181. 13.2 Several closely related species concepts exist
  182. 13.2.1 The biological species concept
  183. 13.2.2 The ecological species concept
  184. 13.2.3 The phenetic species concept
  185. 13.3 Isolating barriers
  186. 13.3.1 Isolating barriers prevent interbreeding between species
  187. 13.3.2 Sperm or pollen competition can produce subtle prezygotic isolation
  188. 13.3.3 Closely related African cichlid fish species are prezygotically isolated by their color patterns, but are not postzygotically isolated
  189. 13.4 Geographic variation within a species can be understood in terms of population genetic and ecological processes
  190. 13.4.1 Geographic variation exists in all species and can be caused by adaptation to local conditions
  191. 13.4.2 Geographic variation may also be caused by genetic drift
  192. 13.4.3 Geographic variation may take the form of a cline
  193. 13.5 “Population thinking” and “typological thinking” are two ways of thinking about biological diversity
  194. 13.6 Ecological influences on the form of a species are shown by the phenomenon of character displacement
  195. 13.7 Some controversial issues exist between the phenetic, biological, and ecological species concepts
  196. 13.7.1 The phenetic species concept suffers from serious theoretical defects
  197. 13.7.2 Ecological adaptation and gene flow can provide complementary, or in some cases competing, theories of the integrity of species
  198. 13.7.3 Both selection and genetic incompatibility provide explanations of reduced hybrid fitness
  199. 13.8 Taxonomic concepts may be nominalist or realist
  200. 13.8.1 The species category
  201. 13.8.2 Categories below the species level
  202. 13.8.3 Categories above the species level
  203. 13.9 Conclusion
  204. Summary
  205. Further reading
  206. Study and review questions
  207. 14 Speciation
  208. 14.1 How can one species split into two reproductively isolated groups of organisms?
  209. 14.2 A newly evolving species could theoretically have an allopatric, parapatric, or sympatric geographic relation with its ancestor
  210. 14.3 Reproductive isolation can evolve as a by-product of divergence in allopatric populations
  211. 14.3.1 Laboratory experiments illustrate how separately evolving populations of a species tend incidentally to evolve reproductive isolation
  212. 14.3.2 Prezygotic isolation evolves because it is genetically correlated with the characters undergoing divergence
  213. 14.3.3 Reproductive isolation is often observed when members of geographically distant populations are crossed
  214. 14.3.4 Speciation as a by-product of divergence is well documented
  215. 14.4 The Dobzhansky–Muller theory of postzygotic isolation
  216. 14.4.1 The Dobzhansky–Muller theory is a genetic theory of postzygotic isolation, explaining it by interactions among many gene loci
  217. 14.4.2 The Dobzhansky–Muller theory is supported by extensive genetic evidence
  218. 14.4.3 The Dobzhansky–Muller theory has broad biological plausibility
  219. 14.4.4 The Dobzhansky–Muller theory solves a general problem of “valley crossing” during speciation
  220. 14.4.5 Postzygotic isolation may have ecological as well as genetic causes
  221. 14.4.6 Postzygotic isolation usually follows Haldane’s rule
  222. 14.5 An interim conclusion: two solid generalizations about speciation
  223. 14.6 Reinforcement
  224. 14.6.1 Reproductive isolation may be reinforced by natural selection
  225. 14.6.2 Preconditions for reinforcement may be short lived
  226. 14.6.3 Empirical tests of reinforcement are inconclusive or fail to support the theory
  227. 14.7 Some plant species have originated by hybridization
  228. 14.8 Speciation may occur in non-allopatric populations, either parapatrically or sympatrically
  229. 14.9 Parapatric speciation
  230. 14.9.1 Parapatric speciation begins with the evolution of a stepped cline
  231. 14.9.2 Evidence for the theory of parapatric speciation is relatively weak
  232. 14.10 Sympatric speciation
  233. 14.10.1 Sympatric speciation is theoretically possible
  234. 14.10.2 Phytophagous insects may split sympatrically by host shifts
  235. 14.10.3 Phylogenies can be used to test whether speciation has been sympatric or allopatric
  236. 14.11 The influence of sexual selection in speciation is one current trend in research
  237. 14.12 Identification of genes that cause reproductive isolation is another current trend in research
  238. 14.13 Conclusion
  239. Summary
  240. Further reading
  241. Study and review questions
  242. 15 The Reconstruction of Phylogeny
  243. 15.1 Phylogenies express the ancestral relations between species
  244. 15.2 Phylogenies are inferred from morphological characters using cladistic techniques
  245. 15.3 Homologies provide reliable evidence for phylogenetic inference, and homoplasies provide unreliable evidence
  246. 15.4 Homologies can be distinguished from homoplasies by several criteria
  247. 15.5 Derived homologies are more reliable indicators of phylogenetic relations than are ancestral homologies
  248. 15.6 The polarity of character states can be inferred by several techniques
  249. 15.6.1 Outgroup comparison
  250. 15.6.2 The fossil record
  251. 15.6.3 Other methods
  252. 15.7 Some character conflict may remain after cladistic character analysis is complete
  253. 15.8 Molecular sequences are becoming increasingly important in phylogenetic inference, and they have distinct properties
  254. 15.9 Several statistical techniques exist to infer phylogenies from molecular sequences
  255. 15.9.1 An unrooted tree is a phylogeny in which the common ancestor is unspecified
  256. 15.9.2 One class of molecular phylogenetic techniques uses molecular distances
  257. 15.9.3 Molecular evidence may need to be adjusted for the problem of multiple hits
  258. 15.9.4 A second class of phylogenetic techniques uses the principle of parsimony
  259. 15.9.5 A third class of phylogenetic techniques uses the principle of maximum likelihood
  260. 15.9.6 Distance, parsimony, and maximum likelihood methods are all used, but their popularity has changed over time
  261. 15.10 Molecular phylogenetics in action
  262. 15.10.1 Different molecules evolve at different rates and molecular evidence can be tuned to solve particular phylogenetic problems
  263. 15.10.2 Molecular phylogenies can now be produced rapidly, and are used in medical research
  264. 15.11 Several problems have been encountered in molecular phylogenetics
  265. 15.11.1 Molecular sequences can be difficult to align
  266. 15.11.2 The number of possible trees may be too large for them all to be analyzed
  267. 15.11.3 Species in a phylogeny may have diverged too little or too much
  268. 15.11.4 Different lineages may evolve at different rates
  269. 15.11.5 Paralogous genes may be confused with orthologous genes
  270. 15.11.6 Conclusion: problems in molecular phylogenetics
  271. 15.12 Paralogous genes can be used to root unrooted trees
  272. 15.13 Molecular evidence successfully challenged paleontological evidence in the analysis of human phylogenetic relations
  273. 15.14 Unrooted trees can be inferred from other kinds of evidence, such as chromosomal inversions in Hawaiian fruitflies
  274. 15.15 Conclusion
  275. Summary
  276. Further reading
  277. Study and review questions
  278. 16 Classification and Evolution
  279. 16.1 Biologists classify species into a hierarchy of groups
  280. 16.2 There are phenetic and phylogenetic principles of classification
  281. 16.3 There are phenetic, cladistic, and evolutionary schools of classification
  282. 16.4 A method is needed to judge the merit of a school of classification
  283. 16.5 Phenetic classification uses distance measures and cluster statistics
  284. 16.6 Phylogenetic classification uses inferred phylogenetic relations
  285. 16.6.1 Hennig’s cladism classifies species by their phylogenetic branching relations
  286. 16.6.2 Cladists distinguish monophyletic, paraphyletic, and polyphyletic groups
  287. 16.6.3 A knowledge of phylogeny does not simply tell us the rank levels in Linnaean classification
  288. 16.7 Evolutionary classification is a synthesis of phenetic and phylogenetic principles
  289. 16.8 The principle of divergence explains why phylogeny is hierarchical
  290. 16.9 Conclusion
  291. Summary
  292. Further reading
  293. Study and review questions
  294. 17 Evolutionary Biogeography
  295. 17.1 Species have defined geographic distributions
  296. 17.2 Ecological characteristics of a species limit its geographic distribution
  297. 17.3 Geographic distributions are influenced by dispersal
  298. 17.4 Geographic distributions are influenced by climate, such as in the ice ages
  299. 17.5 Local adaptive radiations occur on island archipelagos
  300. 17.6 Species of large geographic areas tend to be more closely related to other local species than to ecologically similar species elsewhere in the globe
  301. 17.7 Geographic distributions are influenced by vicariance events, some of which are caused by plate tectonic movements
  302. 17.8 The Great American Interchange
  303. 17.9 Conclusion
  304. Summary
  305. Further reading
  306. Study and review questions
  307. Part five Macroevolution
  308. 18 The History of Life
  309. 18.1 Fossils are remains of organisms from the past and are preserved in sedimentary rocks
  310. 18.2 Geological time is conventionally divided into a series of eras, periods, and epochs
  311. 18.2.1 Successive geological ages were first recognized by characteristic fossil faunas
  312. 18.2.2 Geological time is measured in both absolute and relative terms
  313. 18.3 The history of life: the Precambrian
  314. 18.3.1 The origin of life
  315. 18.3.2 The origin of cells
  316. 18.3.3 The origin of multicellular life
  317. 18.4 The Cambrian explosion
  318. 18.5 Evolution of land plants
  319. 18.6 Vertebrate evolution
  320. 18.6.1 Colonization of the land
  321. 18.6.2 Mammals evolved from the reptiles in a long series of small changes
  322. 18.7 Human evolution
  323. 18.7.1 Four main classes of change occurred during hominin evolution
  324. 18.7.2 Fossil records show something of our ancestors for the past 4 million years
  325. 18.8 Macroevolution may or may not be an extrapolated form of microevolution
  326. Summary
  327. Further reading
  328. Study and review questions
  329. 19 Evolutionary Genomics
  330. 19.1 Our expanding knowledge of genome sequences is making it possible to ask, and answer, questions about the evolution of genomes
  331. 19.2 The human genome documents the history of the human gene set since early life
  332. 19.3 The history of duplications can be inferred in a genomic sequence
  333. 19.4 Genome size can shrink by gene loss
  334. 19.5 Symbiotic mergers, and horizontal gene transfer, between species influence genome evolution
  335. 19.6 The X/Y sex chromosomes provide an example of evolutionary genomic research at the chromosomal level
  336. 19.7 Genome sequences can be used to study the history of non-coding DNA
  337. 19.8 Conclusion
  338. Summary
  339. Further reading
  340. Study and review questions
  341. 20 Evolutionary Developmental Biology
  342. 20.1 Changes in development, and the genes controlling development, underlie morphological evolution
  343. 20.2 The theory of recapitulation is a classic idea (largely discredited) about the relation between development and evolution
  344. 20.3 Humans may have evolved from ancestral apes by changes in regulatory genes
  345. 20.4 Many genes that regulate development have been identified recently
  346. 20.5 Modern developmental genetic discoveries have challenged and clarified the meaning of homology
  347. 20.6 The Hox gene complex has expanded at two points in the evolution of animals
  348. 20.7 Changes in the embryonic expression of genes are associated with evolutionary changes in morphology
  349. 20.8 Evolution of genetic switches enables evolutionary innovation, making the system more “evolvable”
  350. 20.9 Conclusion
  351. Summary
  352. Further reading
  353. Study and review questions
  354. 21 Rates of Evolution
  355. 21.1 Rates of evolution can be expressed in “darwins,” as illustrated by a study of horse evolution
  356. 21.1.1 How do population genetic, and fossil, evolutionary rates compare?
  357. 21.1.2 Rates of evolution observed in the short term can explain speciation over longer time periods in Darwin’s finches
  358. 21.2 Why do evolutionary rates vary?
  359. 21.3 The theory of punctuated equilibrium applies the theory of allopatric speciation to predict the pattern of change in the fossil record
  360. 21.4 What is the evidence for punctuated equilibrium and for phyletic gradualism?
  361. 21.4.1 A satisfactory test requires a complete stratigraphic record and biometrical evidence
  362. 21.4.2 Caribbean bryozoans from the Upper Miocene and Lower Pliocene show a punctuated equilibrial pattern of evolution
  363. 21.4.3 Ordovician trilobites show gradual evolutionary change
  364. 21.4.4 Conclusion
  365. 21.5 Evolutionary rates can be measured for non-continuous character changes, as illustrated by a study of “living fossil” lungfish
  366. 21.6 Taxonomic data can be used to describe the rate of evolution of higher taxonomic groups
  367. 21.7 Conclusion
  368. Summary
  369. Further reading
  370. Study and review questions
  371. 22 Coevolution
  372. 22.1 Coevolution can give rise to coadaptations between species
  373. 22.2 Coadaptation suggests, but is not conclusive evidence of, coevolution
  374. 22.3 Insect–plant coevolution
  375. 22.3.1 Coevolution between insects and plants may have driven the diversification of both taxa
  376. 22.3.2 Two taxa may show mirror-image phylogenies, but coevolution is only one of several explanations for this pattern
  377. 22.3.3 Cophylogenies are not found when phytophagous insects undergo host shifts to exploit phylogenetically unrelated but chemically similar plants
  378. 22.3.4 Coevolution between plants and insects may explain the grand pattern of diversification in the two taxa
  379. 22.4 Coevolutionary relations will often be diffuse
  380. 22.5 Parasite–host coevolution
  381. 22.5.1 Evolution of parasitic virulence
  382. 22.5.2 Parasites and their hosts may have cophylogenies
  383. 22.6 Coevolution can proceed in an “arms race”
  384. 22.6.1 Coevolutionary arms races can result in evolutionary escalation
  385. 22.7 The probability that a species will go extinct is approximately independent of how long it has existed
  386. 22.8 Antagonistic coevolution can have various forms, including the Red Queen mode
  387. 22.9 Both biological and physical hypotheses should be tested on macroevolutionary observations
  388. Summary
  389. Further reading
  390. Study and review questions
  391. 23 Extinction and Radiation
  392. 23.1 The number of species in a taxon increases during phases of adaptive radiation
  393. 23.2 Causes and consequences of extinctions can be studied in the fossil record
  394. 23.3 Mass extinctions
  395. 23.3.1 The fossil record of extinction rates shows recurrent rounds of mass extinctions
  396. 23.3.2 The best studied mass extinction occurred at the Cretaceous–Tertiary boundary
  397. 23.3.3 Several factors can contribute to mass extinctions
  398. 23.4 Distributions of extinction rates may fit a power law
  399. 23.5 Changes in the quality of the sedimentary record through time are associated with changes in the observed extinction rate
  400. 23.6 Species selection
  401. 23.6.1 Characters that evolve within taxa may influence extinction and speciation rates, as illustrated by snails with planktonic and direct development
  402. 23.6.2 Differences in the persistence of ecological niches will influence macroevolutionary patterns
  403. 23.6.3 When species selection operates, the factors that control macroevolution differ from the factors that control microevolution
  404. 23.6.4 Forms of species selection may change during mass extinctions
  405. 23.7 One higher taxon may replace another, because of chance, environmental change, or competitive replacement
  406. 23.7.1 Taxonomic patterns through time can provide evidence about the cause of replacements
  407. 23.7.2 Two bryozoan groups are a possible example of a competitive replacement
  408. 23.7.3 Mammals and dinosaurs are a classic example of independent replacement, but recent molecular evidence has complicated the interpretation
  409. 23.8 Species diversity may have increased logistically or exponentially since the Cambrian, or it may have increased little at all
  410. 23.9 Conclusion: biologists and paleontologists have held a range of views about the importance of mass extinctions in the history of life
  411. Summary
  412. Further reading
  413. Study and review questions
  414. Glossary
  415. Answers to Study and Review Questions
  416. References
  417. Index